SNP Profiles matching LCT EEN 362

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	GG	AA	CC	GG	TT	CC	AA	CC	AT	GG	GG	AC	CC	GG
1._RUQ_1554	_	_	CC	GG	TT	CC	AA	CC	AT	_	GG	AC	CC	GG
2._LCT_EEN_368	GG	AA	AC	GG	TT	CC	AG	CC	AA	GG	GG	AC	CC	GG

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	CC	CC	GG	GT	CC	CG	GG	TT	TT	GG	AT	CT	AA	CT
1._RUQ_1554	CC	CC	_	GT	_	CG	GG	TT	_	_	_	_	AA	-
2._LCT_EEN_368	CC	CC	AG	GG	CC	CG	GG	TT	TT	GG	AT	CC	AA	CT

	29	30	31	32	33	34	35	36	37
_Input profile	GG	TT	GG	TT	AC	TT	TT	CC	CC	X_X	X_X	X_X	X_X	X_X
1._RUQ_1554	_	_	GG	_	_	_	TT	CC	_	X_X	X_X	X_X	X_X	X_X
2._LCT_EEN_368	GG	TT	GG	TT	AA	TT	TT	CC	CC	X_X	X_X	X_X	X_X	X_X

Input profile: LCT_EEN_362

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Barbados

Dapeng Zhang, 2014

1._LCT_EEN_412 RUQ_1554

identical
21 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._LCT_EEN_368

90.5 %
37 shared markers

International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: Barbados

Dapeng Zhang, 2014

Key to SNP Markers

Key to SNP Markers

1	TcSNP25	2	TcSNP32	3	TcSNP144	4	TcSNP150	5	TcSNP151
6	TcSNP193	7	TcSNP230	8	TcSNP242	9	TcSNP372	10	TcSNP429
11	TcSNP469	12	TcSNP529	13	TcSNP534	14	TcSNP560	15	TcSNP591
16	TcSNP619	17	TcSNP645	18	TcSNP723	19	TcSNP836	20	TcSNP872
21	TcSNP878	22	TcSNP891	23	TcSNP917	24	TcSNP929	25	TcSNP953
26	TcSNP994	27	TcSNP998	28	TcSNP1060	29	TcSNP1062	30	TcSNP1165
31	TcSNP1253	32	TcSNP1270	33	TcSNP1350	34	TcSNP1414	35	TcSNP1442
36	TcSNP1458	37	TcSNP1520